STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_2660Uncharacterized protein family UPF0150; InterPro IPR005357; KEGG: swo:Swol_1660 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0150). (141 aa)    
Predicted Functional Partners:
Sgly_2661
YcfA family protein; InterPro IPR012933; KEGG: swo:Swol_1661 hypothetical protein; PFAM: YcfA-like; SPTR: Putative uncharacterized protein; PFAM: YcfA-like protein.
   
 
 0.835
Sgly_1076
KEGG: dsy:DSY3841 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
Sgly_0886
YcfA family protein; InterPro IPR012933; KEGG: npu:Npun_R4600 YcfA family protein; PFAM: YcfA-like; SPTR: YcfA family protein; PFAM: YcfA-like protein.
   
 
 0.624
Sgly_3060
YcfA family protein; InterPro IPR012933; KEGG: clj:CLJU_c31450 hypothetical protein; PFAM: YcfA-like; SPTR: Phage protein; PFAM: YcfA-like protein.
   
 
 0.624
Sgly_2407
KEGG: ttm:Tthe_1878 protein of unknown function UPF0150; SPTR: Putative uncharacterized protein; PFAM: HicB family.
 
     0.615
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.