STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_2698Transferase hexapeptide repeat containing protein; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: dsy:DSY4021 hypothetical protein; PFAM: Bacterial transferase hexapeptide repeat; SPTR: Putative uncharacterized protein. (171 aa)    
Predicted Functional Partners:
Sgly_3243
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.769
Sgly_2100
Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746: IPR013766; KEGG: dsy:DSY2429 hypothetical protein; PFAM: Thioredoxin domain; SPTR: Putative uncharacterized protein; TIGRFAM: Thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
    
   0.439
Sgly_2696
COGs: COG3442 glutamine amidotransferase; InterPro IPR011698; KEGG: dhd:Dhaf_1346 CobB/CobQ domain protein glutamine amidotransferase; PFAM: CobB/CobQ-like glutamine amidotransferase; SPTR: Putative uncharacterized protein; PFAM: CobB/CobQ-like glutamine amidotransferase domain.
       0.414
Sgly_2697
Domain of unknown function DUF1727; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR013221: IPR013564; KEGG: dsy:DSY4019 hypothetical protein; PFAM: Domain of unknown function DUF1727; Mur ligase, central; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain.
       0.414
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
    0.400
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.