STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_2803InterPro IPR003731; KEGG: cbe:Cbei_0627 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor. (113 aa)    
Predicted Functional Partners:
Sgly_2772
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2539 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.801
Sgly_2775
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2500 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
    0.798
Sgly_2743
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: dsy:DSY4009 putative nitrogenase iron-molybdenum protein alpha chain; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Putative nitrogenase iron-molybdenum protein alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
    0.796
Sgly_2744
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2540 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
    0.791
Sgly_2793
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: fsu:Fisuc_1078 oxidoreductase/nitrogenase component 1; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Oxidoreductase/nitrogenase component 1; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
    0.790
Sgly_2810
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: cbe:Cbei_0628 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB.
 
    0.790
Sgly_2787
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2539 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.
  
    0.789
Sgly_0993
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: ckr:CKR_0741 hypothetical protein; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Putative uncharacterized protein; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
    0.784
Sgly_0995
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: fsu:Fisuc_1078 oxidoreductase/nitrogenase component 1; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Oxidoreductase/nitrogenase component 1; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
    0.783
Sgly_2786
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2540 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
    0.783
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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