STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_2954InterPro IPR010090; KEGG: dde:Dde_0934 phage tail tape measure protein TP901, core region; PFAM: Phage tail tape measure protein TP901, core region; SPTR: Phage tail tape measure protein core region; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region. (812 aa)    
Predicted Functional Partners:
Sgly_2949
Hypothetical protein; COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47; KEGG: pmx:PERMA_1809 hypothetical protein; SPTR: Baseplate J family protein; PFAM: Baseplate J-like protein.
 
     0.929
Sgly_2953
KEGG: dvm:DvMF_1299 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.779
Sgly_0555
Hypothetical protein; COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47; KEGG: pmx:PERMA_1809 hypothetical protein; SPTR: Baseplate J family protein; PFAM: Baseplate J-like protein.
 
     0.776
Sgly_2602
Hypothetical protein; COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47; KEGG: pmx:PERMA_1809 hypothetical protein; SPTR: Baseplate J family protein; PFAM: Baseplate J-like protein.
 
     0.776
Sgly_3124
Hypothetical protein; COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47; KEGG: pmx:PERMA_1809 hypothetical protein; SPTR: Baseplate J family protein; PFAM: Baseplate J-like protein.
 
     0.776
Sgly_2952
KEGG: coc:Coch_0642 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.743
Sgly_2948
KEGG: pmx:PERMA_1821 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.704
Sgly_2950
KEGG: dvu:DVU1103 baseplate assembly protein, putative; SPTR: Predicted protein.
       0.704
Sgly_2951
Hypothetical protein; KEGG: mma:MM_2821 tryptophan synthase subunit alpha; SPTR: Predicted protein.
       0.704
Sgly_2947
KEGG: dae:Dtox_4253 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.700
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.