STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_3012Lytic transglycosylase catalytic; COGs: COG2247 Putative cell wall-binding domain; InterPro IPR008258: IPR007253; KEGG: dsy:DSY3348 hypothetical protein; PFAM: Lytic transglycosylase-like, catalytic; Putative cell wall binding repeat 2; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase SLT domain; Putative cell wall binding repeat 2. (537 aa)    
Predicted Functional Partners:
Sgly_0636
Beta-galactosidase/beta-glucuronidase-like protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; KEGG: dhd:Dhaf_4077 beta-galactosidase/beta-glucuronidase-like protein; SPTR: Putative uncharacterized protein; PFAM: domain.
  
    0.760
Sgly_3219
Hypothetical protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; KEGG: dsy:DSY4846 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
Sgly_1848
Plasmid segregation actin-type ATPase ParM; KEGG: dhd:Dhaf_3280 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.733
Sgly_3002
O-antigen polymerase; InterPro IPR007016; KEGG: dhd:Dhaf_4498 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase; PFAM: O-Antigen ligase.
 
     0.730
Sgly_3003
Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: dsy:DSY3339 hypothetical protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein.
 
     0.730
Sgly_2098
KEGG: dhd:Dhaf_3035 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.675
Sgly_1793
InterPro IPR006674: IPR003607; KEGG: dhd:Dhaf_2787 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative uncharacterized protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
  
     0.664
Sgly_3246
KEGG: dsy:DSY4860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.654
Sgly_0629
Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: dhd:Dhaf_4099 protein of unknown function DUF342; PFAM: Protein of unknown function DUF342; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF342).
  
     0.653
Sgly_3205
KEGG: bcy:Bcer98_2036 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.650
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.