STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_3145KEGG: amt:Amet_1950 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3486). (186 aa)    
Predicted Functional Partners:
Sgly_3144
Phage uncharacterized protein; InterPro IPR006517; KEGG: dae:Dtox_4228 phage uncharacterized protein; SPTR: Putative uncharacterized protein; TIGRFAM: Phage uncharacterised protein, C-terminal; PFAM: Terminase-like family; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain.
       0.778
Sgly_3146
KEGG: amt:Amet_4370 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.778
Sgly_3147
KEGG: amt:Amet_4371 hypothetical protein; SPTR: Predicted protein.
       0.778
Sgly_3148
KEGG: amt:Amet_4372 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.760
Sgly_3142
Phage head morphogenesis protein, SPP1 gp7 family; COGs: COG2369 conserved hypothetical protein homolog of phage Mu protein gp30; InterPro IPR006528; KEGG: dvu:DVU1119 virion morphogenesis protein; PFAM: Phage putative head morphogenesis protein, SPP1 gp7; SPTR: Phage putative head morphogenesis protein, SPP1 gp7 family; TIGRFAM: Phage putative head morphogenesis protein, SPP1 gp7; PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.
       0.750
Sgly_3143
Protein of unknown function DUF935; COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: sat:SYN_02303 Mu-like prophage FluMu protein GP29; PFAM: Protein of unknown function DUF935; SPTR: Phage head morphogenesis protein; PFAM: Protein of unknown function (DUF935).
       0.749
Sgly_3150
Mor transcription activator domain protein; InterPro IPR014875; KEGG: amt:Amet_4373 hypothetical protein; PFAM: Mor transcription activator; SPTR: Mor transcription activator family; PFAM: Mor transcription activator family.
       0.499
Sgly_3140
KEGG: mag:amb1767 hypothetical protein; SPTR: Hypothetical cytosolic protein.
       0.472
Sgly_3141
COGs: COG4388 Mu-like prophage I protein; InterPro IPR019295; KEGG: sat:SYN_02300 Mu-like prophage FluMu I protein; PFAM: Mu-like prophage I protein; SPTR: Putative uncharacterized protein; PFAM: Mu-like prophage I protein.
       0.472
Sgly_3151
Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: cno:NT01CX_2058 hypothetical protein; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; N-acetylmuramoyl-L-alanine amidase.
       0.468
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.