STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_3208Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tte:TTE0594 SAM-dependent methyltransferase; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferases; PFAM: Methyltransferase domain. (200 aa)    
Predicted Functional Partners:
Sgly_3207
COGs: COG1647 Esterase/lipase; KEGG: nth:Nther_2012 putative esterase/lipase; SPTR: Carboxylesterase; PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal.
       0.488
Sgly_0750
Transposase-like Mu; InterPro IPR001584: IPR015378; KEGG: amt:Amet_0388 transposase; PFAM: Transposase-like, Mu, C-terminal; Integrase, catalytic core; SPTR: Transposase; PFAM: Mu transposase, C-terminal; Bacteriophage Mu transposase.
  
     0.417
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.