Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OHY95111.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)    
Predicted Functional Partners:
OHY91263.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.678
OHY90498.1
Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.670
OHY95112.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
glk
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.
     
  0.553
OHY88901.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.534
OHY95113.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
OHY93330.1
Aminoimidazole riboside kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.456
OHY92504.1
Replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.447
OHY92454.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.447
OHY92463.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.447
Your Current Organism:
Aeromonas sobria
NCBI taxonomy Id: 646
Other names: A. sobria, ATCC 43979, Aeromonas hybridization group 7 (HG7), Aeromonas sp. TH002, Aeromonas sp. TH004, Aeromonas sp. TH005, Aeromonas sp. TH018, Aeromonas sp. TH032, Aeromonas sp. TH035, Aeromonas sp. TH037, Aeromonas sp. TH040, Aeromonas sp. TH070, Aeromonas sp. TH082, Aeromonas sp. TH103, Aeromonas sp. TH112, Aeromonas sp. TH116, Aeromonas sp. TH119, CCUG 14830, CECT 4245, CIP 74.33, DSM 19176, JCM 2139, LMG 3783, LMG:3783, NCTC 12979, strain 208
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