STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHY95111.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)    
Predicted Functional Partners:
OHY92504.1
Replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.770
OHY92454.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.742
OHY92463.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.742
OHY91263.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.730
OHY92474.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.722
OHY92455.1
Phage major capsid protein, P2 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.694
OHY92457.1
Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.687
OHY92453.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.678
OHY92452.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.676
OHY92464.1
Phage virion morphogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.673
Your Current Organism:
Aeromonas sobria
NCBI taxonomy Id: 646
Other names: A. sobria, ATCC 43979, Aeromonas hybridization group 7 (HG7), Aeromonas sp. TH002, Aeromonas sp. TH004, Aeromonas sp. TH005, Aeromonas sp. TH018, Aeromonas sp. TH032, Aeromonas sp. TH035, Aeromonas sp. TH037, Aeromonas sp. TH040, Aeromonas sp. TH070, Aeromonas sp. TH082, Aeromonas sp. TH103, Aeromonas sp. TH112, Aeromonas sp. TH116, Aeromonas sp. TH119, CCUG 14830, CECT 4245, CIP 74.33, DSM 19176, JCM 2139, LMG 3783, LMG:3783, NCTC 12979, strain 208
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