Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
OHY94810.1MSHA biogenesis protein MshI; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)    
Predicted Functional Partners:
OHY94809.1
MSHA biogenesis protein MshI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
OHY94808.1
MSHA biogenesis protein MshJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
OHY89718.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.911
OHY94806.1
Pilus (MSHA type) biogenesis protein MshL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.901
OHY94804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
OHY94795.1
MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.812
OHY94796.1
MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.809
OHY94797.1
MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.806
OHY94807.1
MSHA biogenesis protein MshK; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
OHY89721.1
Pilus assembly protein PilQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.780
Your Current Organism:
Aeromonas sobria
NCBI taxonomy Id: 646
Other names: A. sobria, ATCC 43979, Aeromonas hybridization group 7 (HG7), Aeromonas sp. TH002, Aeromonas sp. TH004, Aeromonas sp. TH005, Aeromonas sp. TH018, Aeromonas sp. TH032, Aeromonas sp. TH035, Aeromonas sp. TH037, Aeromonas sp. TH040, Aeromonas sp. TH070, Aeromonas sp. TH082, Aeromonas sp. TH103, Aeromonas sp. TH112, Aeromonas sp. TH116, Aeromonas sp. TH119, CCUG 14830, CECT 4245, CIP 74.33, DSM 19176, JCM 2139, LMG 3783, LMG:3783, NCTC 12979, strain 208
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