STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP00_1817t-SNARE coiled-coil homology domain-containing protein. (252 aa)    
Predicted Functional Partners:
EHP00_125
Uncharacterized protein.
   
 0.999
ykt6
Ykt6.
    
 0.999
EHP00_276
Uncharacterized protein.
   
 0.995
SLY1
SLY1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.991
sec18
ATP-dependent zinc metalloprotease; Belongs to the AAA ATPase family.
    
 0.923
RAB1A
RAB1A.
    
 0.874
SEC24
SEC24.
    
 0.840
EHP00_1769
Uncharacterized protein.
   
 
 0.811
SEC24C
Vesicle coat complex COPII.
    
 0.807
SAR1
SAR1; Belongs to the small GTPase superfamily. Arf family.
    
 0.785
Your Current Organism:
Enterocytozoon hepatopenaei
NCBI taxonomy Id: 646526
Other names: E. hepatopenaei, Enterocytozoon sp. ST-2009a
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