STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snf12-1Snf12-1. (394 aa)    
Predicted Functional Partners:
EHP00_1893
Uncharacterized protein.
    
 0.994
Actin-1
Actin-1; Belongs to the actin family.
   
 0.978
HHF1
HHF1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.821
HTA1
HTA1.
    
   0.751
cenpa
Cenpa.
    
 0.702
Histone
Histone.
    
 0.702
HHT1
HHT1.
    
 0.668
ISW2
ISW2.
    
 0.620
EHP00_2405
Transcription initiation factor IIF auxiliarysubunit.
    
 
 0.562
HTB1
HTB1.
    
   0.534
Your Current Organism:
Enterocytozoon hepatopenaei
NCBI taxonomy Id: 646526
Other names: E. hepatopenaei, Enterocytozoon sp. ST-2009a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.