STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP00_2161LSU ribosomal protein L40E Ubiquitin. (119 aa)    
Predicted Functional Partners:
LRRC1
LRRC1.
    
 0.999
EHP00_2689
Uncharacterized protein.
    
 0.999
SAP5
SAP5.
   
 0.999
ubi3
Ubiquitin-40S ribosomal protein S31 fusion protein.
   
 0.998
rps24e
Rps24e.
  
 0.998
RPS6
RPS6.
   
 0.997
RPL18
RPL18.
  
 0.996
RPS15
RPS15; Belongs to the universal ribosomal protein uS19 family.
   
 0.996
Rps11
Rps11.
   
 0.996
RPS4
RPS4.
   
 0.996
Your Current Organism:
Enterocytozoon hepatopenaei
NCBI taxonomy Id: 646526
Other names: E. hepatopenaei, Enterocytozoon sp. ST-2009a
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