STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ube3aUbe3a. (700 aa)    
Predicted Functional Partners:
pim1
Pim1.
 
  
 0.907
udk-2
Udk.
    
  0.885
LRRC1
LRRC1.
    
 0.871
EHP00_2689
Uncharacterized protein.
    
 0.871
HSP90
HSP90.
    
  0.870
Tra2b
Tra2b.
     
 0.862
EHP00_2676
Guanylate kinase-like domain-containing protein.
    
  0.857
gmk
Gmk.
    
  0.857
EHP00_2611
Uncharacterized protein.
    
  0.772
EHP00_2597
Uncharacterized protein.
    
  0.772
Your Current Organism:
Enterocytozoon hepatopenaei
NCBI taxonomy Id: 646526
Other names: E. hepatopenaei, Enterocytozoon sp. ST-2009a
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