STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP00_2710Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (347 aa)    
Predicted Functional Partners:
NOG1
NOG1.
 
 
   0.881
spb1
Spb1.
   
 
 0.836
IMPA1
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.789
EHP00_110
Brix domain-containing protein.
   
   0.781
EHP00_1029
WD_REPEATS_REGION domain-containing protein.
   
   0.756
dbe
Dbe.
   
   0.756
EHP00_446
Methyltransf_11 domain-containing protein.
   
  
 0.756
EHP00_1390
Uncharacterized protein.
   
   0.740
mak16
Mak16.
   
   0.733
rpf1
Rpf1.
   
   0.733
Your Current Organism:
Enterocytozoon hepatopenaei
NCBI taxonomy Id: 646526
Other names: E. hepatopenaei, Enterocytozoon sp. ST-2009a
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