STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM39703.1PFAM: NADPH-dependent FMN reductase. (193 aa)    
Predicted Functional Partners:
AFM41509.1
PFAM: NADPH-dependent FMN reductase; manually curated.
  
     0.751
AFM40924.1
Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase.
  
     0.704
AFM39702.1
Putative flavoprotein; PFAM: Flavodoxin; Metallo-beta-lactamase superfamily.
 
    0.663
AFM39704.1
CheY-like receiver domain-containing protein; PFAM: Response regulator receiver domain.
       0.615
AFM40838.1
PFAM: NADPH-dependent FMN reductase.
  
     0.573
AFM41883.1
PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit.
  
    0.533
AFM41880.1
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit.
  
     0.505
AFM41884.1
PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.
  
     0.431
AFM42033.1
PFAM: Domain of unknown function (DUF2383).
  
  
 0.406
AFM40378.1
PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein.
 
     0.404
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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