STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM40578.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
AFM40579.1
PFAM: Competence protein A; TIGRFAM: ethanolamine utilization protein EutJ family protein.
 
  
 0.968
AFM40580.1
BMC domain-containing protein; PFAM: BMC domain.
 
     0.953
AFM40584.1
PFAM: Ethanolamine utilisation protein EutQ.
 
  
 0.936
AFM40577.1
Ethanolamine utilization protein; PFAM: Ethanolamine utilisation - propanediol utilisation; TIGRFAM: ethanolamine utilization protein, EutP; Belongs to the EutP/PduV family.
 
  
 0.922
AFM40581.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome.
 
  
 0.895
AFM40576.1
Ethanolamine utilization protein; PFAM: BMC domain.
 
   
 0.875
AFM40583.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: BMC domain.
 
  
 0.837
AFM40582.1
Putative NADH:ubiquinone oxidoreductase, subunit RnfC; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.
 
     0.819
AFM42079.1
Putative HD superfamily hydrolase; PFAM: HD domain.
  
     0.722
AFM39686.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.701
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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