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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM40658.1Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c. (129 aa)    
Predicted Functional Partners:
AFM39941.1
Cytochrome b subunit of the bc complex; PFAM: Prokaryotic cytochrome b561; Cytochrome b(C-terminal)/b6/petD.
  
 
 0.998
AFM42164.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
 
 
 0.952
AFM39940.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
 
 0.942
AFM42163.1
Hypothetical protein.
  
 
 0.930
AFM39994.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
 
 0.923
AFM39993.1
PFAM: Cytochrome c; manually curated.
 
 
 0.907
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.889
AFM41240.1
PFAM: Polysulphide reductase, NrfD.
   
 
 0.755
AFM41656.1
PFAM: Polysulphide reductase, NrfD.
   
 
 0.755
AFM40451.1
Sulfite oxidase-like oxidoreductase; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain.
   
 
 0.751
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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