Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFM40658.1Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c. (129 aa)    
Predicted Functional Partners:
AFM39941.1
Cytochrome b subunit of the bc complex; PFAM: Prokaryotic cytochrome b561; Cytochrome b(C-terminal)/b6/petD.
  
 
 0.995
AFM42164.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
 
 
 0.955
AFM39940.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
 
 0.945
AFM39837.1
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit.
  
 
 0.914
AFM43311.1
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.
  
 
 0.914
AFM39994.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
 
 0.912
AFM39993.1
PFAM: Cytochrome c; manually curated.
 
 
 0.910
AFM42163.1
Hypothetical protein.
  
 
 0.888
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.880
AFM39217.1
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
  
 0.801
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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