STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM42104.1Hypothetical protein. (88 aa)    
Predicted Functional Partners:
AFM41988.1
TIGRFAM: putative membrane protein, TIGR04086 family.
  
     0.770
AFM42414.1
Hypothetical protein.
  
     0.745
AFM43520.1
PFAM: Predicted membrane protein (DUF2232).
  
     0.744
AFM43484.1
Hypothetical protein.
  
     0.735
AFM39911.1
Hypothetical protein.
  
     0.704
AFM42110.1
Hypothetical protein.
  
     0.701
AFM43102.1
PFAM: Protein of unknown function (DUF1659).
  
     0.645
AFM43233.1
PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
     0.643
AFM39662.1
Hypothetical protein.
  
     0.636
AFM39173.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
     0.628
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.