STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM42106.1Zn-dependent dipeptidase, microsomal dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19). (317 aa)    
Predicted Functional Partners:
AFM39810.1
Putative glutamine amidotransferase; PFAM: Peptidase C26.
     0.896
AFM42105.1
Putative metal-dependent phosphoesterase, PHP family; PFAM: PHP domain.
       0.772
AFM42104.1
Hypothetical protein.
       0.523
AFM39719.1
Putative hydrocarbon binding protein (contains V4R domain); PFAM: V4R domain.
  
  
 0.515
AFM39830.1
Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase family.
 
     0.471
AFM41798.1
Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase family.
 
     0.441
AFM42098.1
L-aminopeptidase/D-esterase; PFAM: Peptidase family S58.
 
     0.426
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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