STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM42585.1PFAM: Aldo/keto reductase family. (342 aa)    
Predicted Functional Partners:
AFM42586.1
Dipeptide/tripeptide permease; PFAM: Major Facilitator Superfamily.
 
     0.740
AFM42584.1
PFAM: Putative rRNA methylase.
       0.686
AFM42587.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2225).
       0.559
AFM41269.1
Putative adenylylsulfate reductase-associated electron transfer protein QmoB; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
  
   0.501
AFM41857.1
PFAM: NAD synthase; TIGRFAM: TIGR00268 family protein.
 
    0.424
AFM41855.1
PFAM: Protein of unknown function DUF111.
 
    0.406
AFM41468.1
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
  
   0.402
AFM41562.1
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
  
   0.402
AFM42464.1
Uncharacterized Fe-S center protein; PFAM: Domain of unknown function (DUF362).
 
    0.401
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.