STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM42913.1PFAM: Uncharacterized conserved protein (DUF2164). (75 aa)    
Predicted Functional Partners:
AFM40731.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2087).
  
     0.507
AFM40394.1
PFAM: Domain of unknown function (DUF955).
  
     0.494
AFM42912.1
PFAM: PhoH-like protein.
       0.465
AFM39447.1
Putative ATPase.
  
     0.462
AFM41131.1
Putative transcriptional regulator.
  
     0.445
AFM40093.1
Hypothetical protein.
  
     0.438
AFM43006.1
Putative Zn peptidase; PFAM: Domain of unknown function (DUF955).
  
     0.425
AFM42281.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.