Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFM39677.1 | AFM39683.1 | Desaci_0615 | Desaci_0621 | PFAM: Glycosyl transferase family 2. | Hypothetical protein. | 0.804 |
AFM39677.1 | AFM40278.1 | Desaci_0615 | Desaci_1249 | PFAM: Glycosyl transferase family 2. | Hypothetical protein. | 0.740 |
AFM39677.1 | AFM40563.1 | Desaci_0615 | Desaci_1559 | PFAM: Glycosyl transferase family 2. | PFAM: Bacterial cellulose synthase subunit. | 0.767 |
AFM39677.1 | AFM42468.1 | Desaci_0615 | Desaci_3587 | PFAM: Glycosyl transferase family 2. | PFAM: Peptidase A4 family. | 0.730 |
AFM39677.1 | AFM43076.1 | Desaci_0615 | Desaci_4219 | PFAM: Glycosyl transferase family 2. | Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase. | 0.558 |
AFM39677.1 | AFM43283.1 | Desaci_0615 | Desaci_4440 | PFAM: Glycosyl transferase family 2. | Hypothetical protein. | 0.769 |
AFM39677.1 | AFM43294.1 | Desaci_0615 | Desaci_4451 | PFAM: Glycosyl transferase family 2. | PFAM: Acyltransferase family. | 0.735 |
AFM39683.1 | AFM39677.1 | Desaci_0621 | Desaci_0615 | Hypothetical protein. | PFAM: Glycosyl transferase family 2. | 0.804 |
AFM39683.1 | AFM40278.1 | Desaci_0621 | Desaci_1249 | Hypothetical protein. | Hypothetical protein. | 0.753 |
AFM39683.1 | AFM40563.1 | Desaci_0621 | Desaci_1559 | Hypothetical protein. | PFAM: Bacterial cellulose synthase subunit. | 0.787 |
AFM39683.1 | AFM40564.1 | Desaci_0621 | Desaci_1560 | Hypothetical protein. | PFAM: Fibronectin type III domain. | 0.537 |
AFM39683.1 | AFM42468.1 | Desaci_0621 | Desaci_3587 | Hypothetical protein. | PFAM: Peptidase A4 family. | 0.732 |
AFM39683.1 | AFM43076.1 | Desaci_0621 | Desaci_4219 | Hypothetical protein. | Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase. | 0.556 |
AFM39683.1 | AFM43283.1 | Desaci_0621 | Desaci_4440 | Hypothetical protein. | Hypothetical protein. | 0.760 |
AFM39683.1 | AFM43294.1 | Desaci_0621 | Desaci_4451 | Hypothetical protein. | PFAM: Acyltransferase family. | 0.721 |
AFM40278.1 | AFM39677.1 | Desaci_1249 | Desaci_0615 | Hypothetical protein. | PFAM: Glycosyl transferase family 2. | 0.740 |
AFM40278.1 | AFM39683.1 | Desaci_1249 | Desaci_0621 | Hypothetical protein. | Hypothetical protein. | 0.753 |
AFM40278.1 | AFM40563.1 | Desaci_1249 | Desaci_1559 | Hypothetical protein. | PFAM: Bacterial cellulose synthase subunit. | 0.734 |
AFM40278.1 | AFM40564.1 | Desaci_1249 | Desaci_1560 | Hypothetical protein. | PFAM: Fibronectin type III domain. | 0.477 |
AFM40278.1 | AFM42468.1 | Desaci_1249 | Desaci_3587 | Hypothetical protein. | PFAM: Peptidase A4 family. | 0.639 |
page 1 of 4