STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM43436.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (291 aa)    
Predicted Functional Partners:
AFM43437.1
Hypothetical protein.
 
     0.947
AFM43435.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
 
  
 0.945
AFM39825.1
ABC-type multidrug transport system, permease component.
 
  
 0.928
AFM39457.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
 
  
 0.682
AFM40169.1
Hypothetical protein.
  
 
 0.571
AFM41419.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 
 0.564
AFM39343.1
Hypothetical protein.
  
 
 0.563
AFM43066.1
Hypothetical protein.
  
 
 0.563
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.464
AFM41956.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
 
  
 0.449
Your Current Organism:
Desulfosporosinus acidiphilus
NCBI taxonomy Id: 646529
Other names: D. acidiphilus SJ4, Desulfosporosinus acidiphilus DSM 22704, Desulfosporosinus acidiphilus SJ4, Desulfosporosinus acidiphilus str. SJ4, Desulfosporosinus acidiphilus strain SJ4, Desulfosporosinus sp. SJ4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.