STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fumCFumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (473 aa)    
Predicted Functional Partners:
SER50585.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
 
 0.981
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 0.979
SER91541.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.976
SER50603.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 0.966
SER59619.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.942
SER83551.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.931
SER87237.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
 0.915
SER50561.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
     
  0.910
SER55836.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
   
  0.894
SER74729.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.888
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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