STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER73720.1Peptide/nickel transport system permease protein. (319 aa)    
Predicted Functional Partners:
SER73738.1
Peptide/nickel transport system permease protein.
 
 0.996
SER73749.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.996
SER73767.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.992
SER65553.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
  0.987
SER73703.1
Peptide/nickel transport system substrate-binding protein.
 0.976
SER65571.1
Oligopeptide/dipeptide transporter, C-terminal region; Belongs to the ABC transporter superfamily.
 
 0.951
SER95201.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.874
SER90109.1
Oligopeptide transport system permease protein.
 
 
 0.868
SER65515.1
Peptide/nickel transport system permease protein.
 
 
 0.866
SES05077.1
Peptide/nickel transport system permease protein.
 
 
 0.864
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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