STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER73503.1Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (294 aa)    
Predicted Functional Partners:
SER73467.1
Urea transport system ATP-binding protein.
 
 0.999
SER73477.1
Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SER73517.1
Urea transport system substrate-binding protein.
 
 
 0.999
SER73451.1
Urea transport system ATP-binding protein.
 
 
 0.990
SER91959.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
SER91977.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.980
SER73429.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
 
 
 0.970
SER91993.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.953
SER91926.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.931
SER91948.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.791
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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