STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER77897.1Polar amino acid transport system ATP-binding protein. (263 aa)    
Predicted Functional Partners:
SER84760.1
Polar amino acid transport system permease protein.
  0.988
SER77905.1
Polar amino acid transport system permease protein.
  0.985
SER74038.1
Polar amino acid transport system permease protein.
  0.972
SER56473.1
Glutamate transport system permease protein.
 0.932
SER56490.1
Glutamate transport system permease protein.
 0.928
SER63077.1
Glutamate transport system permease protein.
 0.922
SER63093.1
Glutamate transport system permease protein.
 0.915
SER78116.1
ABC-2 type transport system ATP-binding protein.
 
  
  0.900
SER99389.1
ABC-2 type transport system permease protein.
 
      0.833
SER84703.1
Polar amino acid transport system substrate-binding protein.
 0.828
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.