STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER83752.1Two-component system, OmpR family, response regulator MprA. (230 aa)    
Predicted Functional Partners:
SER83788.1
Two-component system, OmpR family, sensor histidine kinase MprB.
 0.995
SER84199.1
PAS fold-containing protein.
  
 0.990
SER88934.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
  0.971
SER69560.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 0.936
SER77665.1
Two-component system, OmpR family, sensor kinase.
 0.931
SES03852.1
Signal transduction histidine kinase.
 0.929
SER83715.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.790
SER83731.1
Cyanophycinase.
       0.782
SER83694.1
Putative membrane protein.
       0.770
SER59855.1
Transcriptional regulatory protein, C terminal.
  
     0.684
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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