STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER84523.1DNA-binding transcriptional regulator, GntR family. (223 aa)    
Predicted Functional Partners:
SER89112.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.825
SER84502.1
Hypothetical protein.
 
    0.589
SER84537.1
FdrA protein.
       0.579
SER84199.1
PAS fold-containing protein.
   
  
 0.573
SER84575.1
Protein of unknown function.
       0.565
SER77430.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.560
SER84640.1
Carbamate kinase; Belongs to the carbamate kinase family.
       0.553
SER84601.1
Protein of unknown function.
       0.552
SER63556.1
Acetolactate synthase, small subunit.
  
    0.544
SES03071.1
DNA-binding transcriptional regulator, IclR family.
  
    0.503
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.