STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER84537.1FdrA protein. (558 aa)    
Predicted Functional Partners:
sucC
succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
 
 0.997
SER84575.1
Protein of unknown function.
     0.994
SER65793.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.985
SER91541.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.959
SER84601.1
Protein of unknown function.
 
   0.956
SER59619.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.951
SER55250.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.933
SER50603.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 0.928
SER50585.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
  
 0.860
SER84640.1
Carbamate kinase; Belongs to the carbamate kinase family.
 
    0.858
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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