STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER89132.1Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (562 aa)    
Predicted Functional Partners:
SER89169.1
L-lactate dehydrogenase complex protein LldF.
 
  
 0.942
SER89186.1
L-lactate dehydrogenase complex protein LldG.
 
  
 0.900
SER91541.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.862
SER89146.1
L-lactate dehydrogenase complex protein LldE.
 
  
 0.837
SER47631.1
L-lactate oxidase.
  
 0.811
SER89112.1
DNA-binding transcriptional regulator, FadR family.
 
  
 0.765
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.752
SES03489.1
D-lactate dehydrogenase.
 
  
 0.654
SER59619.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.630
SER88442.1
PTS system, fructose-specific IIC component.
      
 0.615
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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