STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER92804.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
SER92770.1
Type IV secretory system Conjugative DNA transfer.
 
     0.895
SER92739.1
Hypothetical protein.
 
     0.814
SER92818.1
Hypothetical protein.
       0.790
SER92689.1
Hypothetical protein.
 
     0.784
SER68798.1
Single-stranded DNA-binding protein.
 
     0.778
SER87813.1
TraM recognition site of TraD and TraG.
 
     0.772
SER68815.1
TraM recognition site of TraD and TraG.
 
     0.769
SER92784.1
Single-strand binding protein family protein.
       0.761
SER92560.1
Homeodomain-like domain-containing protein.
  
     0.715
SER69124.1
Homeodomain-like domain-containing protein.
  
     0.713
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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