Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SER56637.1 | SER60117.1 | SAMN05443377_102189 | SAMN05443377_103127 | Competence protein ComEC. | Cardiolipin synthase. | 0.620 |
| SER56637.1 | SER92971.1 | SAMN05443377_102189 | SAMN05443377_11939 | Competence protein ComEC. | ACT domain-containing protein; Belongs to the UPF0237 family. | 0.578 |
| SER56637.1 | SER92988.1 | SAMN05443377_102189 | SAMN05443377_11940 | Competence protein ComEC. | Hypothetical protein. | 0.418 |
| SER56637.1 | polA | SAMN05443377_102189 | SAMN05443377_101101 | Competence protein ComEC. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.435 |
| SER60117.1 | SER56637.1 | SAMN05443377_103127 | SAMN05443377_102189 | Cardiolipin synthase. | Competence protein ComEC. | 0.620 |
| SER60117.1 | SER65897.1 | SAMN05443377_103127 | SAMN05443377_10541 | Cardiolipin synthase. | Phosphoserine phosphatase. | 0.417 |
| SER60117.1 | SER92971.1 | SAMN05443377_103127 | SAMN05443377_11939 | Cardiolipin synthase. | ACT domain-containing protein; Belongs to the UPF0237 family. | 0.405 |
| SER60117.1 | glyA | SAMN05443377_103127 | SAMN05443377_11645 | Cardiolipin synthase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.458 |
| SER65875.1 | SER65897.1 | SAMN05443377_10540 | SAMN05443377_10541 | Homoserine dehydrogenase. | Phosphoserine phosphatase. | 0.971 |
| SER65875.1 | SER92971.1 | SAMN05443377_10540 | SAMN05443377_11939 | Homoserine dehydrogenase. | ACT domain-containing protein; Belongs to the UPF0237 family. | 0.508 |
| SER65875.1 | SES01012.1 | SAMN05443377_10540 | SAMN05443377_12914 | Homoserine dehydrogenase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.992 |
| SER65875.1 | SES01483.1 | SAMN05443377_10540 | SAMN05443377_13015 | Homoserine dehydrogenase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.500 |
| SER65875.1 | glyA | SAMN05443377_10540 | SAMN05443377_11645 | Homoserine dehydrogenase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.543 |
| SER65897.1 | SER60117.1 | SAMN05443377_10541 | SAMN05443377_103127 | Phosphoserine phosphatase. | Cardiolipin synthase. | 0.417 |
| SER65897.1 | SER65875.1 | SAMN05443377_10541 | SAMN05443377_10540 | Phosphoserine phosphatase. | Homoserine dehydrogenase. | 0.971 |
| SER65897.1 | SER92971.1 | SAMN05443377_10541 | SAMN05443377_11939 | Phosphoserine phosphatase. | ACT domain-containing protein; Belongs to the UPF0237 family. | 0.437 |
| SER65897.1 | SES01012.1 | SAMN05443377_10541 | SAMN05443377_12914 | Phosphoserine phosphatase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.479 |
| SER65897.1 | SES01483.1 | SAMN05443377_10541 | SAMN05443377_13015 | Phosphoserine phosphatase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.950 |
| SER65897.1 | glyA | SAMN05443377_10541 | SAMN05443377_11645 | Phosphoserine phosphatase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.940 |
| SER92961.1 | SER92971.1 | SAMN05443377_11938 | SAMN05443377_11939 | NADH dehydrogenase. | ACT domain-containing protein; Belongs to the UPF0237 family. | 0.491 |
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