STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER99274.1Uncharacterized membrane protein, predicted cobalt tansporter CbtA. (311 aa)    
Predicted Functional Partners:
SER99288.1
Probable cobalt transporter subunit (CbtB).
 
     0.901
SER99260.1
Polyferredoxin.
       0.574
SER58020.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
     0.568
cobB-2
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.498
SER58082.1
precorrin-3B C17-methyltransferase/precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.
       0.469
SER72487.1
precorrin-6A synthase.
 
     0.432
SER56229.1
Hypothetical protein.
  
     0.431
SES01995.1
High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
     0.422
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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