STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES00563.1solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (538 aa)    
Predicted Functional Partners:
SES00574.1
Hypothetical protein.
 
     0.922
SER84199.1
PAS fold-containing protein.
 
 
 0.863
SER76164.1
Proline dehydrogenase.
  
  
 0.792
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.658
SER84041.1
Urea carboxylase.
  
  
 0.637
SER75650.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.486
SER84382.1
Acyl-CoA reductase.
  
 
 0.486
SER97613.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.486
SER91541.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
    0.484
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.472
Your Current Organism:
Propionibacterium cyclohexanicum
NCBI taxonomy Id: 64702
Other names: ATCC 700429, CCUG 48885, CIP 105414, DSM 16859, IAM 14535, JCM 21245, NBRC 103082, NRIC 0247, P. cyclohexanicum, Propionicibacterium cyclohexanicum, strain TA-12
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