STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH06096.1KEGG: mae:Maeo_0351 small GTP-binding protein; TIGRFAM: Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related. (190 aa)    
Predicted Functional Partners:
AEH07505.1
PFAM: Ankyrin repeat; KEGG: mae:Maeo_1250 ankyrin.
  
 0.992
AEH06097.1
PFAM: Protein of unknown function DUF1621; KEGG: mae:Maeo_0352 hypothetical protein.
  
    0.911
AEH07305.1
KEGG: mfs:MFS40622_0299 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
 
 0.889
AEH06127.1
SMART: Phospholipase D/Transphosphatidylase; KEGG: mae:Maeo_0041 phospholipase D/transphosphatidylase.
  
 0.885
rps11
Ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
  
 0.868
AEH06063.1
PFAM: Tetratricopeptide TPR-1; KEGG: mvu:Metvu_0462 tetratricopeptide repeat protein.
  
 0.867
AEH06104.1
KEGG: mae:Maeo_1447 hypothetical protein; PFAM: Uncharacterised conserved protein UCP006598; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
  
 0.867
AEH07326.1
KEGG: ptm:GSPATT00023750001 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
  
 0.867
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 0.865
AEH07434.1
KEGG: mae:Maeo_0769 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein.
 
 0.855
Your Current Organism:
Methanothermococcus okinawensis
NCBI taxonomy Id: 647113
Other names: M. okinawensis IH1, Methanothermococcus okinawensis DSM 14208, Methanothermococcus okinawensis IH1, Methanothermococcus okinawensis str. IH1, Methanothermococcus okinawensis strain IH1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.