Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEH06355.1KEGG: mmq:MmarC5_0926 hypothetical protein. (237 aa)    
Predicted Functional Partners:
AEH06354.1
KEGG: mmq:MmarC5_0925 hypothetical protein.
       0.773
AEH06352.1
Hypothetical protein.
       0.445
AEH06353.1
KEGG: mmq:MmarC5_0923 hypothetical protein.
       0.445
AEH06356.1
KEGG: mmq:MmarC5_0928 hypothetical protein.
       0.424
AEH06357.1
KEGG: mmq:MmarC5_0929 hypothetical protein.
       0.419
Your Current Organism:
Methanothermococcus okinawensis
NCBI taxonomy Id: 647113
Other names: M. okinawensis IH1, Methanothermococcus okinawensis DSM 14208, Methanothermococcus okinawensis IH1, Methanothermococcus okinawensis str. IH1, Methanothermococcus okinawensis strain IH1
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