Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEH06708.1 | AEH06709.1 | Metok_0731 | Metok_0732 | KEGG: mae:Maeo_1161 hypothetical protein. | KEGG: mmp:MMP0003 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal. | 0.716 |
AEH06708.1 | AEH06710.1 | Metok_0731 | Metok_0733 | KEGG: mae:Maeo_1161 hypothetical protein. | Non-specific serine/threonine protein kinase; PFAM: RIO-like kinase; RIO2 kinase, winged helix, N-terminal; KEGG: mae:Maeo_1162 protein of unknown function RIO1; SMART: RIO kinase. | 0.416 |
AEH06709.1 | AEH06708.1 | Metok_0732 | Metok_0731 | KEGG: mmp:MMP0003 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal. | KEGG: mae:Maeo_1161 hypothetical protein. | 0.716 |
AEH06709.1 | AEH06710.1 | Metok_0732 | Metok_0733 | KEGG: mmp:MMP0003 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal. | Non-specific serine/threonine protein kinase; PFAM: RIO-like kinase; RIO2 kinase, winged helix, N-terminal; KEGG: mae:Maeo_1162 protein of unknown function RIO1; SMART: RIO kinase. | 0.505 |
AEH06710.1 | AEH06708.1 | Metok_0733 | Metok_0731 | Non-specific serine/threonine protein kinase; PFAM: RIO-like kinase; RIO2 kinase, winged helix, N-terminal; KEGG: mae:Maeo_1162 protein of unknown function RIO1; SMART: RIO kinase. | KEGG: mae:Maeo_1161 hypothetical protein. | 0.416 |
AEH06710.1 | AEH06709.1 | Metok_0733 | Metok_0732 | Non-specific serine/threonine protein kinase; PFAM: RIO-like kinase; RIO2 kinase, winged helix, N-terminal; KEGG: mae:Maeo_1162 protein of unknown function RIO1; SMART: RIO kinase. | KEGG: mmp:MMP0003 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal. | 0.505 |