STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH07322.1KEGG: mfe:Mefer_1223 hypothetical protein. (161 aa)    
Predicted Functional Partners:
AEH07324.1
KEGG: mfe:Mefer_1225 PKD domain containing protein; PFAM: PKD; SMART: PKD.
  
    0.893
AEH07323.1
Hypothetical protein; PFAM: Class III signal peptide motif; KEGG: mfe:Mefer_1224 protein of unknown function DUF361.
       0.860
AEH07544.1
Exosortase EpsH-related protein; KEGG: mae:Maeo_1456 hypothetical protein; manually curated; PFAM: Exosortase EpsH-related.
      
 0.847
AEH07320.1
KEGG: mae:Maeo_0852 hypothetical protein.
       0.826
AEH07321.1
PFAM: Protein of unknown function DUF2341; KEGG: mae:Maeo_0853 hypothetical protein.
       0.735
AEH07319.1
PFAM: Protein of unknown function DUF2341; KEGG: mae:Maeo_0851 hypothetical protein.
       0.726
AEH07325.1
KEGG: mae:Maeo_0854 hypothetical protein.
       0.702
AEH06085.1
PFAM: Nucleoside recognition; KEGG: mfs:MFS40622_1278 nucleoside recognition domain protein.
   
    0.405
AEH06876.1
PFAM: Nucleoside recognition; KEGG: mfe:Mefer_1137 nucleoside recognition domain protein.
   
    0.405
AEH07450.1
PFAM: Nucleoside recognition; KEGG: mfe:Mefer_1489 nucleoside recognition domain protein.
   
    0.405
Your Current Organism:
Methanothermococcus okinawensis
NCBI taxonomy Id: 647113
Other names: M. okinawensis IH1, Methanothermococcus okinawensis DSM 14208, Methanothermococcus okinawensis IH1, Methanothermococcus okinawensis str. IH1, Methanothermococcus okinawensis strain IH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.