STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP88577.1KEGG: apo:Arcpr_1440 protein of unknown function DUF6 transmembrane; overlaps another CDS with the same product name. (31 aa)    
Predicted Functional Partners:
EHP88578.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: mka:MK0670 NADH-flavin reductase; overlaps another CDS with the same product name.
       0.773
pgk
KEGG: mfs:MFS40622_1053 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.533
EHP88575.1
Adenylate kinase; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily.
       0.429
EHP88576.1
KEGG: mmx:MmarC6_1137 hypothetical protein.
       0.429
EHP88573.1
PFAM: protein of unknown function DUF366; KEGG: mfs:MFS40622_1356 protein of unknown function DUF366.
       0.407
EHP88574.1
KEGG: mmz:MmarC7_0911 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.407
EHP88580.1
KEGG: mmx:MmarC6_1139 methanogenesis marker protein 2; TIGRFAM: methanogenesis marker protein 2; PFAM: AIR synthase related protein; AIR synthase related protein domain protein.
       0.405
Your Current Organism:
Methanotorris formicicus
NCBI taxonomy Id: 647171
Other names: M. formicicus Mc-S-70, Methanotorris formicicus ATCC BAA-687, Methanotorris formicicus DSM 16983, Methanotorris formicicus Mc-S-70, Methanotorris formicicus stain Mc-S-70, Methanotorris formicicus str. Mc-S-70, Methanotorris sp. Mc-S-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.