STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP87931.1KEGG: hypothetical protein. (152 aa)    
Predicted Functional Partners:
EHP87930.1
KEGG: hypothetical protein.
       0.961
EHP87929.1
KEGG: ferredoxin.
       0.762
EHP87928.1
KEGG: mfs:MFS40622_0366 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.687
EHP86566.1
KEGG: mfe:Mefer_0924 hypothetical protein.
     
 0.661
EHP87927.1
KEGG: mif:Metin_0966 hypothetical protein.
       0.647
EHP87932.1
KEGG: mif:Metin_1237 DNA helicase; TIGRFAM: DNA helicase; SMART: DEAD-like helicase.
       0.645
EHP83736.1
PFAM: cysteine-rich small domain; KEGG: hypothetical protein.
     
 0.607
EHP86569.1
KEGG: mmx:MmarC6_0714 hypothetical protein.
  
  
 0.434
EHP87926.1
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: putative monovalent cation/H+ antiporter subunit B.
       0.410
Your Current Organism:
Methanotorris formicicus
NCBI taxonomy Id: 647171
Other names: M. formicicus Mc-S-70, Methanotorris formicicus ATCC BAA-687, Methanotorris formicicus DSM 16983, Methanotorris formicicus Mc-S-70, Methanotorris formicicus stain Mc-S-70, Methanotorris formicicus str. Mc-S-70, Methanotorris sp. Mc-S-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.