STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP87580.1Regulatory protein ArsR; KEGG: mvu:Metvu_1621 transcriptional regulator, TrmB; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR. (103 aa)    
Predicted Functional Partners:
EHP87581.1
KEGG: mae:Maeo_0889 hypothetical protein.
       0.948
EHP87579.1
PFAM: ABC transporter, ATPase, predicted; KEGG: mae:Maeo_1059 hypothetical protein.
       0.774
EHP87578.1
PFAM: AMMECR1 domain protein; KEGG: mfe:Mefer_1175 AMMECR1 domain protein.
       0.636
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
     
 0.609
EHP85121.1
KEGG: mae:Maeo_0297 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper ion binding protein; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
  
  
 0.495
EHP85122.1
KEGG: mae:Maeo_0297 heavy metal translocating P-type ATPase.
  
  
 0.495
EHP87754.1
PFAM: Protein of unknown function DUF2202; KEGG: mae:Maeo_0891 hypothetical protein.
  
    0.471
EHP85478.1
TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; KEGG: mae:Maeo_1029 biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein.
    
 0.463
EHP83378.1
KEGG: mvn:Mevan_0248 hypothetical protein; PFAM: phosphoadenosine phosphosulfate reductase; PUA domain containing protein; SMART: PUA domain containing protein.
 
  
 0.463
EHP83786.1
PFAM: phosphoadenosine phosphosulfate reductase; KEGG: hypothetical protein.
 
  
 0.456
Your Current Organism:
Methanotorris formicicus
NCBI taxonomy Id: 647171
Other names: M. formicicus Mc-S-70, Methanotorris formicicus ATCC BAA-687, Methanotorris formicicus DSM 16983, Methanotorris formicicus Mc-S-70, Methanotorris formicicus stain Mc-S-70, Methanotorris formicicus str. Mc-S-70, Methanotorris sp. Mc-S-70
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