STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_14613Integrase catalytic domain-containing protein. (72 aa)    
Predicted Functional Partners:
ALC60_03624
Putative histone-binding protein Caf1.
    
 0.635
ALC60_06902
Protein lin-52 like protein.
    
 0.628
ALC60_08680
Protein lin-54 like protein.
    
 0.614
ALC60_04036
Protein lin-9 like protein.
    
 0.577
ALC60_06869
Xylosyltransferase oxt.
    
 0.554
ALC60_03484
Replication protein A 32 kDa subunit.
    
 0.545
ALC60_03486
Uncharacterized protein.
    
 0.545
ALC60_01829
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
 0.539
ALC60_10615
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.517
ALC60_12492
DNA repair endonuclease XPF.
    
  0.489
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.