STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_10901Protein-L-isoaspartate O-methyltransferase. (259 aa)    
Predicted Functional Partners:
ALC60_08595
Bifunctional aminoacyl-tRNA synthetase.
     
 0.563
ALC60_01591
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
 
 
   0.489
ALC60_11596
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.476
ALC60_11560
Cullin-5; Belongs to the cullin family.
    
   0.465
ALC60_03648
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
     
 0.460
ALC60_01593
Ribose-5-phosphate isomerase.
    
   0.457
ALC60_03552
Putative deoxyribose-phosphate aldolase.
    
   0.448
ALC60_12770
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.437
ALC60_00710
Eukaryotic translation initiation factor 5A.
     
 0.423
ALC60_13618
Tetratricopeptide repeat protein 7B.
      
 0.410
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.