Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_09845Single-stranded DNA-binding protein 3. (454 aa)    
Predicted Functional Partners:
ALC60_12115
LIM domain-binding protein 2.
    
 
 0.992
ALC60_12119
Uncharacterized protein.
    
 
 0.918
ALC60_04376
Uncharacterized protein.
    
 
 0.870
ALC60_04377
LIM/homeobox protein Lhx3.
    
 
 0.870
ALC60_08133
LIM/homeobox protein Lhx1.
    
 
 0.868
ALC60_03169
Rhombotin-1.
    
 
 0.845
ALC60_03172
Rhombotin-1.
    
 
 0.845
ALC60_09983
LIM domain transcription factor LMO4.1.
    
 
 0.843
ALC60_12743
LIM/homeobox protein Lhx2.
    
 
 0.828
ALC60_12746
Protein apterous.
    
 
 0.828
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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