STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_09346Splicing factor 45. (384 aa)    
Predicted Functional Partners:
ALC60_07677
Calcium homeostasis endoplasmic reticulum protein.
   
 0.999
ALC60_01591
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.994
ALC60_02692
Uncharacterized protein.
   
 0.991
ALC60_08679
Splicing factor 3B subunit 1.
   
 0.971
ALC60_03766
Putative U2 small nuclear ribonucleoprotein A.
   
 0.969
ALC60_01509
SURP and G-patch domain-containing protein 1.
   
 
 0.968
ALC60_13605
Splicing factor 3A subunit 2.
    
 0.956
ALC60_03084
Splicing factor 3A subunit 1.
   
 0.950
ALC60_14767
Transferrin.
   
 0.929
ALC60_02940
Splicing factor 3A subunit 3.
   
 0.929
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.