Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC60_00896 | ALC60_03302 | A0A151XI39 | A0A151XBT5 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.686 |
ALC60_00896 | ALC60_04327 | A0A151XI39 | A0A151X8W2 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Chromodomain-helicase-DNA-binding protein Mi-2 like protein. | 0.513 |
ALC60_00896 | ALC60_07757 | A0A151XI39 | A0A151WYQ1 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | C2H2-type domain-containing protein. | 0.597 |
ALC60_00896 | ALC60_07760 | A0A151XI39 | A0A151WYS5 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.597 |
ALC60_00896 | ALC60_13695 | A0A151XI39 | A0A151WHL8 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Leucine-rich repeat and guanylate kinase domain-containing protein. | 0.924 |
ALC60_03302 | ALC60_00896 | A0A151XBT5 | A0A151XI39 | Leucine-rich repeat serine/threonine-protein kinase 1. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.686 |
ALC60_03302 | ALC60_03611 | A0A151XBT5 | A0A151XBE2 | Leucine-rich repeat serine/threonine-protein kinase 1. | Suppressor of fused like protein. | 0.668 |
ALC60_03302 | ALC60_04327 | A0A151XBT5 | A0A151X8W2 | Leucine-rich repeat serine/threonine-protein kinase 1. | Chromodomain-helicase-DNA-binding protein Mi-2 like protein. | 0.776 |
ALC60_03302 | ALC60_07080 | A0A151XBT5 | A0A151X0U3 | Leucine-rich repeat serine/threonine-protein kinase 1. | Lysine-specific demethylase 6A. | 0.927 |
ALC60_03302 | ALC60_07757 | A0A151XBT5 | A0A151WYQ1 | Leucine-rich repeat serine/threonine-protein kinase 1. | C2H2-type domain-containing protein. | 0.786 |
ALC60_03302 | ALC60_07760 | A0A151XBT5 | A0A151WYS5 | Leucine-rich repeat serine/threonine-protein kinase 1. | Uncharacterized protein. | 0.786 |
ALC60_03302 | ALC60_10312 | A0A151XBT5 | A0A151WRX8 | Leucine-rich repeat serine/threonine-protein kinase 1. | Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.926 |
ALC60_03302 | ALC60_13695 | A0A151XBT5 | A0A151WHL8 | Leucine-rich repeat serine/threonine-protein kinase 1. | Leucine-rich repeat and guanylate kinase domain-containing protein. | 0.999 |
ALC60_03611 | ALC60_03302 | A0A151XBE2 | A0A151XBT5 | Suppressor of fused like protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.668 |
ALC60_03611 | ALC60_07757 | A0A151XBE2 | A0A151WYQ1 | Suppressor of fused like protein. | C2H2-type domain-containing protein. | 0.644 |
ALC60_03611 | ALC60_07760 | A0A151XBE2 | A0A151WYS5 | Suppressor of fused like protein. | Uncharacterized protein. | 0.644 |
ALC60_04327 | ALC60_00896 | A0A151X8W2 | A0A151XI39 | Chromodomain-helicase-DNA-binding protein Mi-2 like protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.513 |
ALC60_04327 | ALC60_03302 | A0A151X8W2 | A0A151XBT5 | Chromodomain-helicase-DNA-binding protein Mi-2 like protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.776 |
ALC60_04327 | ALC60_07080 | A0A151X8W2 | A0A151X0U3 | Chromodomain-helicase-DNA-binding protein Mi-2 like protein. | Lysine-specific demethylase 6A. | 0.594 |
ALC60_04327 | ALC60_07288 | A0A151X8W2 | A0A151X0B1 | Chromodomain-helicase-DNA-binding protein Mi-2 like protein. | Nuclear factor. | 0.724 |
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