Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC60_03306 | ALC60_06961 | A0A151XBS7 | A0A151X110 | Heterogeneous nuclear ribonucleoprotein H2. | CUGBP Elav-like family member 3. | 0.564 |
ALC60_03306 | ALC60_06964 | A0A151XBS7 | A0A151X1N5 | Heterogeneous nuclear ribonucleoprotein H2. | CUGBP Elav-like family member 4. | 0.564 |
ALC60_03496 | ALC60_06961 | A0A151XB09 | A0A151X110 | Cytochrome b5 reductase 4. | CUGBP Elav-like family member 3. | 0.477 |
ALC60_03496 | ALC60_06964 | A0A151XB09 | A0A151X1N5 | Cytochrome b5 reductase 4. | CUGBP Elav-like family member 4. | 0.477 |
ALC60_03496 | ALC60_07978 | A0A151XB09 | A0A151WYB9 | Cytochrome b5 reductase 4. | Fumarylacetoacetase. | 0.561 |
ALC60_03496 | ALC60_12551 | A0A151XB09 | A0A151WL59 | Cytochrome b5 reductase 4. | Fumarylacetoacetate hydrolase domain-containing protein 2. | 0.561 |
ALC60_04419 | ALC60_06961 | A0A151X913 | A0A151X110 | Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. | CUGBP Elav-like family member 3. | 0.510 |
ALC60_04419 | ALC60_06964 | A0A151X913 | A0A151X1N5 | Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. | CUGBP Elav-like family member 4. | 0.510 |
ALC60_04419 | ALC60_07978 | A0A151X913 | A0A151WYB9 | Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. | Fumarylacetoacetase. | 0.406 |
ALC60_06961 | ALC60_03306 | A0A151X110 | A0A151XBS7 | CUGBP Elav-like family member 3. | Heterogeneous nuclear ribonucleoprotein H2. | 0.564 |
ALC60_06961 | ALC60_03496 | A0A151X110 | A0A151XB09 | CUGBP Elav-like family member 3. | Cytochrome b5 reductase 4. | 0.477 |
ALC60_06961 | ALC60_04419 | A0A151X110 | A0A151X913 | CUGBP Elav-like family member 3. | Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. | 0.510 |
ALC60_06961 | ALC60_06964 | A0A151X110 | A0A151X1N5 | CUGBP Elav-like family member 3. | CUGBP Elav-like family member 4. | 0.570 |
ALC60_06961 | ALC60_07978 | A0A151X110 | A0A151WYB9 | CUGBP Elav-like family member 3. | Fumarylacetoacetase. | 0.756 |
ALC60_06961 | ALC60_09613 | A0A151X110 | A0A151WTR4 | CUGBP Elav-like family member 3. | Uncharacterized protein. | 0.525 |
ALC60_06961 | ALC60_09914 | A0A151X110 | A0A151WT03 | CUGBP Elav-like family member 3. | Methylosome protein 50. | 0.479 |
ALC60_06961 | ALC60_11339 | A0A151X110 | A0A151WPD6 | CUGBP Elav-like family member 3. | Tubulin delta chain; Belongs to the tubulin family. | 0.510 |
ALC60_06961 | ALC60_12551 | A0A151X110 | A0A151WL59 | CUGBP Elav-like family member 3. | Fumarylacetoacetate hydrolase domain-containing protein 2. | 0.579 |
ALC60_06961 | ALC60_14479 | A0A151X110 | A0A151WFE8 | CUGBP Elav-like family member 3. | WD repeat-containing protein 33. | 0.479 |
ALC60_06964 | ALC60_03306 | A0A151X1N5 | A0A151XBS7 | CUGBP Elav-like family member 4. | Heterogeneous nuclear ribonucleoprotein H2. | 0.564 |
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