STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC60_06211Pre-mRNA-splicing factor CWC25 like protein. (488 aa)    
Predicted Functional Partners:
ALC60_03488
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
 0.998
ALC60_03016
Pre-mRNA-processing factor 17.
    
 0.997
ALC60_13555
Coiled-coil domain-containing protein 94.
   
 0.995
ALC60_10212
Cell division cycle 5-related protein.
    
 
 0.993
ALC60_05746
Uncharacterized protein.
    
 
 0.993
ALC60_07572
Protein BUD31 like protein.
    
 
 0.992
ALC60_11934
Pre-mRNA-splicing factor CWC22 like protein.
   
 0.989
ALC60_03183
Pre-mRNA-processing factor 19.
    
 
 0.989
ALC60_10080
Serine/arginine repetitive matrix protein 2.
   
 0.987
ALC60_07740
Pre-mRNA-splicing factor Syf2.
   
 0.986
Your Current Organism:
Trachymyrmex zeteki
NCBI taxonomy Id: 64791
Other names: T. zeteki
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.