ALC60_06068 protein (Trachymyrmex zeteki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ALC60_06068

FYVE, RhoGEF and PH domain-containing protein 4. (712 aa)

Predicted Functional Partners:

ALC60_14078

0.705

ALC60_06275

0.694

ALC60_12078

0.687

ALC60_04575

0.673

ALC60_13327

0.647

ALC60_12954

0.647

ALC60_10390

0.647

ALC60_09099

0.647

ALC60_08375

0.647

ALC60_06232

0.647

Your Current Organism:

Trachymyrmex zeteki

NCBI taxonomy Id: 64791
Other names: T. zeteki

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC60_04575	ALC60_06068	A0A151X890	A0A151X3R9	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	FYVE, RhoGEF and PH domain-containing protein 4.	0.673
ALC60_04575	ALC60_06232	A0A151X890	A0A151X3C5	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Cdc42 like protein.	0.594
ALC60_04575	ALC60_06275	A0A151X890	A0A151X3T8	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Ras-like GTP-binding protein Rho1.	0.638
ALC60_04575	ALC60_09099	A0A151X890	A0A151WV46	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Ras-related C3 botulinum toxin substrate 1.	0.594
ALC60_04575	ALC60_10390	A0A151X890	A0A151WRL2	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Ras-like GTP-binding protein RhoL.	0.594
ALC60_04575	ALC60_12078	A0A151X890	A0A151WMJ0	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	A-kinase anchor protein 13.	0.616
ALC60_04575	ALC60_12954	A0A151X890	A0A151WJX2	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Cdc42 like protein.	0.594
ALC60_04575	ALC60_13327	A0A151X890	A0A151WI97	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Ras-related protein Rac1.	0.594
ALC60_04575	ALC60_14078	A0A151X890	A0A151WGE6	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Rho guanine nucleotide exchange factor 12.	0.644
ALC60_06068	ALC60_04575	A0A151X3R9	A0A151X890	FYVE, RhoGEF and PH domain-containing protein 4.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.673
ALC60_06068	ALC60_06232	A0A151X3R9	A0A151X3C5	FYVE, RhoGEF and PH domain-containing protein 4.	Cdc42 like protein.	0.647
ALC60_06068	ALC60_06275	A0A151X3R9	A0A151X3T8	FYVE, RhoGEF and PH domain-containing protein 4.	Ras-like GTP-binding protein Rho1.	0.694
ALC60_06068	ALC60_08375	A0A151X3R9	A0A151WXV6	FYVE, RhoGEF and PH domain-containing protein 4.	Intersectin-2.	0.647
ALC60_06068	ALC60_09099	A0A151X3R9	A0A151WV46	FYVE, RhoGEF and PH domain-containing protein 4.	Ras-related C3 botulinum toxin substrate 1.	0.647
ALC60_06068	ALC60_10390	A0A151X3R9	A0A151WRL2	FYVE, RhoGEF and PH domain-containing protein 4.	Ras-like GTP-binding protein RhoL.	0.647
ALC60_06068	ALC60_12078	A0A151X3R9	A0A151WMJ0	FYVE, RhoGEF and PH domain-containing protein 4.	A-kinase anchor protein 13.	0.687
ALC60_06068	ALC60_12954	A0A151X3R9	A0A151WJX2	FYVE, RhoGEF and PH domain-containing protein 4.	Cdc42 like protein.	0.647
ALC60_06068	ALC60_13327	A0A151X3R9	A0A151WI97	FYVE, RhoGEF and PH domain-containing protein 4.	Ras-related protein Rac1.	0.647
ALC60_06068	ALC60_14078	A0A151X3R9	A0A151WGE6	FYVE, RhoGEF and PH domain-containing protein 4.	Rho guanine nucleotide exchange factor 12.	0.705
ALC60_06232	ALC60_04575	A0A151X3C5	A0A151X890	Cdc42 like protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.594